Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm43521-201ENSMUST00000197838 255 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm43107-201ENSMUST00000198729 255 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm44594-201ENSMUST00000208982 407 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm12458-201ENSMUST00000119387 495 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm14982-201ENSMUST00000121102 442 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm25360-201ENSMUST00000178786 191 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm27608-201ENSMUST00000184822 162 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm29576-201ENSMUST00000188020 678 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm19641-201ENSMUST00000188432 417 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm28354-201ENSMUST00000190904 678 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm45034-201ENSMUST00000206831 482 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm23264-201ENSMUST00000083372 107 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trem3Q9JKE1 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm14469-201ENSMUST00000118363 202 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm12137-201ENSMUST00000119565 346 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm23886-201ENSMUST00000122684 313 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm16533-201ENSMUST00000140035 228 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm9785-202ENSMUST00000144563 593 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm22730-201ENSMUST00000158085 171 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm18520-201ENSMUST00000174783 658 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm27786-201ENSMUST00000184337 70 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm37281-201ENSMUST00000192412 439 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm18747-201ENSMUST00000198129 648 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm7948-201ENSMUST00000212607 844 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm18043-201ENSMUST00000216741 739 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm8942-201ENSMUST00000217892 400 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm26458-201ENSMUST00000082832 128 ntBASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trem3Q9JKE1 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm22939-201ENSMUST00000103958 131 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm14880-201ENSMUST00000117581 292 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm11367-201ENSMUST00000117802 120 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms