Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm13366-201ENSMUST00000122198 970 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm12238-201ENSMUST00000127764 124 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm24008-201ENSMUST00000157733 138 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm24190-201ENSMUST00000157976 216 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm24770-201ENSMUST00000158505 92 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm24771-201ENSMUST00000158508 137 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Mir7074-201ENSMUST00000183884 63 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm28647-201ENSMUST00000188416 197 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm4501-201ENSMUST00000207330 551 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 AC159188.1-201ENSMUST00000225198 526 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm7135-202ENSMUST00000191257 1905 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Gm18491-201ENSMUST00000192492 1594 ntBASIC1.85□□□□□ -2.11
Smco4Q9JIS3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm24118-201ENSMUST00000103972 126 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm12427-201ENSMUST00000117719 302 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm14383-201ENSMUST00000121637 386 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm3160-201ENSMUST00000128343 607 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm25910-201ENSMUST00000157620 140 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm24291-201ENSMUST00000157633 162 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm24900-201ENSMUST00000158128 134 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm20648-201ENSMUST00000175815 328 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm27921-201ENSMUST00000183968 108 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm36776-201ENSMUST00000207006 203 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 AC132384.5-201ENSMUST00000218562 226 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm8681-201ENSMUST00000219115 618 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm23925-201ENSMUST00000082471 132 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Mir134-201ENSMUST00000083492 71 ntBASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Smco4Q9JIS3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.84□□□□□ -2.12
Smco4Q9JIS3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Smco4Q9JIS3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm23911-201ENSMUST00000104596 134 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm14534-201ENSMUST00000120045 357 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 n-R5s179-201ENSMUST00000122564 118 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm16561-201ENSMUST00000163001 192 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm17935-201ENSMUST00000196649 772 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 AC161520.1-201ENSMUST00000210954 939 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm7034-201ENSMUST00000218638 645 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 AC154184.2-201ENSMUST00000225335 349 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Snora69-201ENSMUST00000083708 131 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm22154-201ENSMUST00000083844 131 ntBASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.83□□□□□ -2.12
Smco4Q9JIS3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm15159-201ENSMUST00000117062 764 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm25271-201ENSMUST00000157273 290 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm25667-201ENSMUST00000157701 275 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm25605-201ENSMUST00000158364 124 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm23268-201ENSMUST00000175494 78 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm23190-201ENSMUST00000180307 64 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm28951-201ENSMUST00000190742 313 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm32033-201ENSMUST00000193483 339 ntBASIC1.82□□□□□ -2.12
Smco4Q9JIS3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Smco4Q9JIS3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms