Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm14008-201ENSMUST00000120483 274 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm13409-201ENSMUST00000122072 546 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm4916-201ENSMUST00000126139 642 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm27490-201ENSMUST00000184754 128 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm8820-201ENSMUST00000204077 571 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm44092-201ENSMUST00000204470 258 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm6929-201ENSMUST00000210930 468 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm25792-201ENSMUST00000083289 100 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm25272-201ENSMUST00000104293 128 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm15148-201ENSMUST00000117602 156 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm13172-201ENSMUST00000118685 256 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm14875-201ENSMUST00000120881 319 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm11200-201ENSMUST00000121698 448 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm22945-201ENSMUST00000158557 157 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm5263-201ENSMUST00000163646 601 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm22120-201ENSMUST00000175590 70 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm10105-201ENSMUST00000184601 270 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm18505-201ENSMUST00000187360 790 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm37455-201ENSMUST00000191993 529 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm8069-201ENSMUST00000197887 154 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm19243-201ENSMUST00000198592 269 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm43406-201ENSMUST00000200356 334 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Gm43715-201ENSMUST00000196307 2715 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Upf1Q9EPU0 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm22021-201ENSMUST00000104353 107 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm24889-201ENSMUST00000104388 132 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm14355-201ENSMUST00000117352 264 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm14500-201ENSMUST00000121647 113 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm24627-201ENSMUST00000122764 138 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm14333-201ENSMUST00000130484 264 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm23667-201ENSMUST00000157466 120 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm24192-201ENSMUST00000157978 145 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm26404-201ENSMUST00000158498 109 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm23365-201ENSMUST00000175019 125 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm25960-201ENSMUST00000175110 125 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm44453-201ENSMUST00000175161 126 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm25195-201ENSMUST00000177656 126 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm24713-201ENSMUST00000178850 107 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm25448-201ENSMUST00000180065 107 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm3010-201ENSMUST00000198805 448 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm42665-201ENSMUST00000202100 586 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm5876-201ENSMUST00000203735 243 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms