Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Hmgn3Q9DCB1 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.19□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Hmgn3Q9DCB1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Hmgn3Q9DCB1 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm13329-201ENSMUST00000117063 265 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm12412-201ENSMUST00000121867 328 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm25910-201ENSMUST00000157620 140 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm26215-201ENSMUST00000158584 139 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm7182-201ENSMUST00000193351 732 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm6012-201ENSMUST00000210821 730 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm6462-201ENSMUST00000081488 304 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm22353-201ENSMUST00000083918 136 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.18□□□□□ -2.06
Hmgn3Q9DCB1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm11357-201ENSMUST00000119758 954 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm5384-201ENSMUST00000120313 463 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm14229-201ENSMUST00000121178 850 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm15235-201ENSMUST00000200572 194 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm43264-201ENSMUST00000202284 325 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm10025-201ENSMUST00000079568 372 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.17□□□□□ -2.06
Hmgn3Q9DCB1 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm14163-201ENSMUST00000117342 217 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm11321-201ENSMUST00000121257 902 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm27470-201ENSMUST00000184070 210 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm18692-201ENSMUST00000193047 511 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm44718-201ENSMUST00000206886 359 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.16□□□□□ -2.06
Hmgn3Q9DCB1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Hmgn3Q9DCB1 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm23082-201ENSMUST00000157852 133 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm9587-201ENSMUST00000172449 454 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm27379-201ENSMUST00000183730 123 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm6059-201ENSMUST00000196903 340 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm18015-201ENSMUST00000214879 316 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.15□□□□□ -2.07
Hmgn3Q9DCB1 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Hmgn3Q9DCB1 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.14□□□□□ -2.07
Hmgn3Q9DCB1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.14□□□□□ -2.07
Hmgn3Q9DCB1 Gm25728-201ENSMUST00000104525 159 ntBASIC2.14□□□□□ -2.07
Hmgn3Q9DCB1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms