Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm23965-201ENSMUST00000157969 142 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm26404-201ENSMUST00000158498 109 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm29031-201ENSMUST00000185316 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm29000-201ENSMUST00000185444 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28204-201ENSMUST00000185934 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28290-201ENSMUST00000186505 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28161-201ENSMUST00000186669 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28860-201ENSMUST00000188103 313 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm28749-209ENSMUST00000189599 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm33163-201ENSMUST00000194504 614 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm38060-201ENSMUST00000194822 464 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm44360-201ENSMUST00000200081 82 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm18442-201ENSMUST00000220925 639 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 AC113031.4-201ENSMUST00000228381 514 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm25081-201ENSMUST00000082534 108 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.09□□□□□ -1.6
Trim42Q9D2H5 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.09□□□□□ -1.6
Trim42Q9D2H5 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm24482-201ENSMUST00000117005 93 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm15044-201ENSMUST00000120703 598 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm12956-201ENSMUST00000122184 414 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm22378-201ENSMUST00000157481 111 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm23318-201ENSMUST00000158000 108 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm23408-201ENSMUST00000158523 265 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm24343-201ENSMUST00000158708 111 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm22114-201ENSMUST00000177756 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm23725-201ENSMUST00000177876 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm24713-201ENSMUST00000178850 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm25235-201ENSMUST00000179933 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm25448-201ENSMUST00000180065 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Mir7072-201ENSMUST00000184542 60 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm29484-201ENSMUST00000186067 324 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm37308-201ENSMUST00000194684 100 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm5552-201ENSMUST00000197149 515 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm22628-201ENSMUST00000082988 107 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim42Q9D2H5 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm12509-201ENSMUST00000118033 609 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm16032-201ENSMUST00000118534 168 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm12311-201ENSMUST00000118803 374 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm12704-201ENSMUST00000119789 464 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm13967-201ENSMUST00000120404 380 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm11909-201ENSMUST00000121424 759 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm22958-201ENSMUST00000122512 184 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm24944-201ENSMUST00000158330 128 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm27818-201ENSMUST00000184536 159 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm37609-201ENSMUST00000191778 678 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm10292-202ENSMUST00000193165 585 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm34768-201ENSMUST00000193884 565 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Mir3535-201ENSMUST00000197651 147 ntBASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm23508-201ENSMUST00000083079 72 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms