Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm14811-201ENSMUST00000117070 117 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm5762-201ENSMUST00000119204 258 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm17164-201ENSMUST00000169013 506 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm18486-201ENSMUST00000184040 298 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm29064-201ENSMUST00000187014 813 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm28069-201ENSMUST00000189926 214 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm43096-201ENSMUST00000196173 421 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm5983-201ENSMUST00000197739 770 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm4987-201ENSMUST00000078326 408 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smc1aQ9CU62 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.71□□□□□ -1.81
Smc1aQ9CU62 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.71□□□□□ -1.81
Smc1aQ9CU62 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.71□□□□□ -1.81
Smc1aQ9CU62 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm24671-201ENSMUST00000104159 158 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm14578-201ENSMUST00000122166 391 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm22718-201ENSMUST00000122701 315 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm23775-201ENSMUST00000158991 249 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm24969-201ENSMUST00000180331 79 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm27522-201ENSMUST00000183949 230 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm38076-201ENSMUST00000193889 450 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm43489-201ENSMUST00000196810 993 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm45312-201ENSMUST00000210566 311 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm24928-201ENSMUST00000083399 107 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm25897-201ENSMUST00000083709 107 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
Smc1aQ9CU62 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.71□□□□□ -1.82
Smc1aQ9CU62 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm25313-201ENSMUST00000101817 116 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm14622-201ENSMUST00000117117 468 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm12149-201ENSMUST00000117511 654 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm22956-201ENSMUST00000122520 80 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm24627-201ENSMUST00000122764 138 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm23773-201ENSMUST00000158985 296 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm23287-201ENSMUST00000179427 116 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm23143-201ENSMUST00000180137 116 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm35931-201ENSMUST00000203931 448 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm44754-201ENSMUST00000208155 400 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm18338-201ENSMUST00000222381 560 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm24871-201ENSMUST00000083099 116 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smc1aQ9CU62 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms