Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm44392-201ENSMUST00000196758 115 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm43224-201ENSMUST00000201567 898 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm44615-201ENSMUST00000206548 358 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm34779-201ENSMUST00000210036 263 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm45245-201ENSMUST00000210082 376 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm7119-201ENSMUST00000221345 695 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm4987-201ENSMUST00000078326 408 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm25792-201ENSMUST00000083289 100 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.71□□□□□ -1.81
Ccdc43Q9CR29 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
Ccdc43Q9CR29 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm14981-201ENSMUST00000117325 943 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm13717-201ENSMUST00000119868 365 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm23463-201ENSMUST00000122468 99 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm14368-201ENSMUST00000145305 415 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm25860-201ENSMUST00000158252 126 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Spin2g-201ENSMUST00000178425 687 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm18486-201ENSMUST00000184040 298 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Mir6914-201ENSMUST00000184999 69 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm29920-201ENSMUST00000206876 754 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm9309-201ENSMUST00000223537 546 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm4017-201ENSMUST00000084813 338 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc43Q9CR29 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm23473-201ENSMUST00000158883 116 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm6374-201ENSMUST00000159051 788 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Mir5136-201ENSMUST00000175573 76 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm25817-201ENSMUST00000177758 121 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm24766-201ENSMUST00000179182 121 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm26933-201ENSMUST00000182320 827 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm7142-201ENSMUST00000194232 586 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm42621-201ENSMUST00000198114 275 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm43227-201ENSMUST00000202239 677 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm44927-201ENSMUST00000207573 716 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm45023-201ENSMUST00000207951 379 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm45912-201ENSMUST00000210646 543 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm18116-201ENSMUST00000220920 537 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm22970-201ENSMUST00000083304 186 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.7□□□□□ -1.82
Ccdc43Q9CR29 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Gm23530-201ENSMUST00000104564 137 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Gm14989-201ENSMUST00000120497 207 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Gm4916-201ENSMUST00000126139 642 ntBASIC3.69□□□□□ -1.82
Ccdc43Q9CR29 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms