Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm24715-201ENSMUST00000102377 95 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm22370-201ENSMUST00000102422 83 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm23746-201ENSMUST00000104229 125 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm14669-201ENSMUST00000118841 250 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm14838-201ENSMUST00000118913 248 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm14792-201ENSMUST00000119725 258 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm23534-201ENSMUST00000157539 97 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm24780-201ENSMUST00000157635 143 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm26041-201ENSMUST00000158148 108 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm17152-201ENSMUST00000172430 535 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm19206-201ENSMUST00000186401 827 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm28769-201ENSMUST00000190176 615 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm32033-201ENSMUST00000193483 339 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim11Q99PQ2 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm11822-201ENSMUST00000119177 415 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm15745-201ENSMUST00000119807 115 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm23537-201ENSMUST00000157536 330 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm3027-201ENSMUST00000167579 451 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm3104-201ENSMUST00000171004 473 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm25749-201ENSMUST00000175485 111 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm38044-201ENSMUST00000192964 487 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm18036-201ENSMUST00000195256 272 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm19177-201ENSMUST00000204520 613 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm7117-201ENSMUST00000071515 387 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm26439-201ENSMUST00000082592 106 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm23939-201ENSMUST00000082880 133 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim11Q99PQ2 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.46□□□□□ -1.54
Trim11Q99PQ2 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm13321-201ENSMUST00000117101 400 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm15553-201ENSMUST00000118757 430 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm14915-201ENSMUST00000120747 204 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm14559-201ENSMUST00000121745 496 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm15986-201ENSMUST00000122153 400 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm23262-201ENSMUST00000158323 168 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm23700-201ENSMUST00000158842 102 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm17162-201ENSMUST00000168538 473 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm5139-201ENSMUST00000175943 249 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm20630-201ENSMUST00000177387 551 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm24167-201ENSMUST00000177733 124 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm24028-201ENSMUST00000178991 124 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm37338-201ENSMUST00000191986 127 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm44456-201ENSMUST00000196554 89 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm10237-201ENSMUST00000078393 273 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.45□□□□□ -1.54
Trim11Q99PQ2 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm14628-201ENSMUST00000117508 635 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms