Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm12458-201ENSMUST00000119387 495 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm23223-201ENSMUST00000158119 127 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm29105-201ENSMUST00000187256 450 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Mir7232-201ENSMUST00000197929 74 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm44399-201ENSMUST00000205043 226 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm44594-201ENSMUST00000208982 407 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm45513-201ENSMUST00000210228 376 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.33□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm26154-201ENSMUST00000102339 96 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm9427-201ENSMUST00000116187 651 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm8475-201ENSMUST00000118211 526 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm3757-201ENSMUST00000125878 675 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm6113-201ENSMUST00000180319 639 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm26991-201ENSMUST00000180950 620 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Mir6363-201ENSMUST00000184880 114 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm28803-201ENSMUST00000190385 764 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm36247-201ENSMUST00000211834 285 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm24446-201ENSMUST00000083982 156 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Gm10794-201ENSMUST00000099624 207 ntBASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm24376-201ENSMUST00000104399 127 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm13504-201ENSMUST00000117490 316 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm15988-201ENSMUST00000118677 367 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm23380-201ENSMUST00000158448 103 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm17064-201ENSMUST00000167690 452 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm25476-201ENSMUST00000175125 185 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm25360-201ENSMUST00000178786 191 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm8676-201ENSMUST00000184206 637 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm33973-201ENSMUST00000195148 534 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Mir3069-201ENSMUST00000198802 65 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc58Q8R3Q6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.3□□□□□ -2.04
Ccdc58Q8R3Q6 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Ccdc58Q8R3Q6 Gm25764-201ENSMUST00000104092 134 ntBASIC2.3□□□□□ -2.04
Ccdc58Q8R3Q6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms