Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mir7056-201ENSMUST00000183776 59 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm28399-201ENSMUST00000186221 318 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm28572-201ENSMUST00000187444 318 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm29365-201ENSMUST00000189461 699 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm37732-201ENSMUST00000194377 316 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm43115-201ENSMUST00000196244 160 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm44472-201ENSMUST00000204922 943 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm6303-201ENSMUST00000210123 471 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm45392-201ENSMUST00000210441 214 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Snord68-201ENSMUST00000082516 86 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm22826-201ENSMUST00000083774 165 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm12156-201ENSMUST00000119188 554 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm11584-201ENSMUST00000120636 325 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm22177-201ENSMUST00000175002 158 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm21850-201ENSMUST00000179792 359 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm26189-201ENSMUST00000179879 107 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm42458-201ENSMUST00000201914 369 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm9309-201ENSMUST00000223537 546 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Neat1-201ENSMUST00000173672 20771 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.25□□□□□ -1.73
Clrn1Q8K445 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clrn1Q8K445 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm13232-201ENSMUST00000121816 632 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm13745-201ENSMUST00000121994 527 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm23169-201ENSMUST00000157157 112 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm24113-201ENSMUST00000157477 276 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm22675-201ENSMUST00000158430 104 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm24546-201ENSMUST00000158652 102 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm3191-201ENSMUST00000167139 346 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm24520-201ENSMUST00000179510 110 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm26701-201ENSMUST00000181571 234 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm27165-201ENSMUST00000183951 232 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Mir6413-201ENSMUST00000184049 108 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm43440-201ENSMUST00000201957 729 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm19252-201ENSMUST00000204705 305 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.24□□□□□ -1.73
Clrn1Q8K445 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Clrn1Q8K445 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms