Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mir592-201ENSMUST00000102113 96 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm24936-201ENSMUST00000122598 247 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm3123-201ENSMUST00000163480 480 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm27342-201ENSMUST00000183530 109 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm27942-201ENSMUST00000184669 101 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm29658-201ENSMUST00000185404 230 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm43115-201ENSMUST00000196244 160 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm2189-201ENSMUST00000201419 429 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm35931-201ENSMUST00000203931 448 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm19177-201ENSMUST00000204520 613 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm8209-201ENSMUST00000206386 553 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm22293-201ENSMUST00000083314 109 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.66□□□□□ -1.82
Ccdc38Q8CDN8 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc38Q8CDN8 Gm25560-201ENSMUST00000104606 176 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Mir294-201ENSMUST00000104710 84 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm14681-201ENSMUST00000118047 411 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm13087-201ENSMUST00000118298 256 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm12213-201ENSMUST00000119924 353 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm14989-201ENSMUST00000120497 207 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm15147-201ENSMUST00000122263 483 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm25341-201ENSMUST00000157461 268 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm23754-201ENSMUST00000157576 63 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm24998-201ENSMUST00000157908 89 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm25817-201ENSMUST00000177758 121 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm24766-201ENSMUST00000179182 121 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm24520-201ENSMUST00000179510 110 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm38329-201ENSMUST00000193473 427 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm7786-201ENSMUST00000210494 436 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm7380-201ENSMUST00000211599 466 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm18116-201ENSMUST00000220920 537 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm6369-201ENSMUST00000069626 412 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc38Q8CDN8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm15125-201ENSMUST00000116185 800 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm12739-201ENSMUST00000119769 382 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Mir1934-201ENSMUST00000158127 83 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm25026-201ENSMUST00000175017 188 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm44718-201ENSMUST00000206886 359 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm17911-201ENSMUST00000210806 877 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm46194-201ENSMUST00000218136 320 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm2710-201ENSMUST00000073196 603 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.64□□□□□ -1.83
Ccdc38Q8CDN8 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm14731-201ENSMUST00000119216 376 ntBASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm15103-201ENSMUST00000119893 871 ntBASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm14898-201ENSMUST00000120202 645 ntBASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm24505-201ENSMUST00000157682 126 ntBASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc38Q8CDN8 Gm26866-201ENSMUST00000180414 802 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms