Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm13614-201ENSMUST00000117306 503 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm23668-201ENSMUST00000157465 111 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm25883-201ENSMUST00000157781 271 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm43295-201ENSMUST00000201439 412 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm7540-201ENSMUST00000219764 926 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm9628-201ENSMUST00000222169 725 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm14537-201ENSMUST00000117464 599 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm23470-201ENSMUST00000157129 120 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm26411-201ENSMUST00000157668 107 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm23268-201ENSMUST00000175494 78 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm5731-201ENSMUST00000190969 481 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm37807-201ENSMUST00000194310 190 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm4928-201ENSMUST00000219622 850 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm7422-201ENSMUST00000220115 640 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Olfr1160-201ENSMUST00000099839 960 ntBASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trub1Q8C0D0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.71□□□□□ -1.97
Trub1Q8C0D0 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm11488-201ENSMUST00000117277 863 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm16533-201ENSMUST00000140035 228 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm8338-201ENSMUST00000163928 363 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Mir6401-201ENSMUST00000184499 109 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm42438-201ENSMUST00000197832 974 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm44526-201ENSMUST00000204664 121 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm18015-201ENSMUST00000214879 316 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm8249-201ENSMUST00000219225 465 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm25739-201ENSMUST00000082886 107 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trub1Q8C0D0 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm7327-201ENSMUST00000120925 652 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm11582-201ENSMUST00000121041 236 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm25341-201ENSMUST00000157461 268 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm22858-201ENSMUST00000174972 76 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm25198-201ENSMUST00000178574 110 ntBASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trub1Q8C0D0 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms