Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm19418-201ENSMUST00000197436 580 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm35702-201ENSMUST00000198653 511 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm43440-201ENSMUST00000201957 729 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm44092-201ENSMUST00000204470 258 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm44852-201ENSMUST00000207950 369 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm45316-201ENSMUST00000210128 162 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm16419-201ENSMUST00000221057 625 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm46994-201ENSMUST00000221523 219 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm26108-201ENSMUST00000083973 191 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trerf1Q8BXJ2 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm14119-201ENSMUST00000119511 235 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm15177-201ENSMUST00000120491 577 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm13557-201ENSMUST00000120771 382 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm25965-201ENSMUST00000157170 93 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Mir5134-201ENSMUST00000175529 78 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm21754-201ENSMUST00000177550 479 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm26988-201ENSMUST00000183296 945 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Mir3620-201ENSMUST00000184710 61 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm38109-201ENSMUST00000195386 181 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm43649-201ENSMUST00000196596 391 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm44726-201ENSMUST00000203427 217 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm45366-201ENSMUST00000209828 384 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm18225-201ENSMUST00000216708 742 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.28□□□□□ -1.72
Trerf1Q8BXJ2 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm24120-201ENSMUST00000103978 129 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm23226-201ENSMUST00000116927 103 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm11830-201ENSMUST00000120175 561 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm14915-201ENSMUST00000120747 204 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm14766-201ENSMUST00000121689 367 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm11692-201ENSMUST00000122121 902 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm24060-201ENSMUST00000157494 95 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm22080-201ENSMUST00000157591 106 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm25908-201ENSMUST00000157624 98 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Mir3104-201ENSMUST00000174911 63 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm20773-201ENSMUST00000178940 681 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm11394-201ENSMUST00000181421 517 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm27952-201ENSMUST00000184748 105 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Mir6975-201ENSMUST00000184879 61 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm28304-201ENSMUST00000185977 312 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms