Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14125-201ENSMUST00000113442 680 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm14811-201ENSMUST00000117070 117 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm9850-201ENSMUST00000117916 227 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm11253-201ENSMUST00000118486 201 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm13082-201ENSMUST00000118877 561 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm26141-201ENSMUST00000175299 126 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Mir6385-201ENSMUST00000184295 105 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Mir7028-201ENSMUST00000185016 64 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm45023-201ENSMUST00000207951 379 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Snord35b-201ENSMUST00000082833 87 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm23939-201ENSMUST00000082880 133 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm22864-201ENSMUST00000083950 130 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm15060-201ENSMUST00000119550 948 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm25107-201ENSMUST00000122472 129 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm22026-201ENSMUST00000122735 281 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm37288-201ENSMUST00000193963 334 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm2189-201ENSMUST00000201419 429 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm44718-201ENSMUST00000206886 359 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm45530-201ENSMUST00000211658 225 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc40Q8BI79 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm16053-201ENSMUST00000120511 188 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm25807-201ENSMUST00000122783 305 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm25058-201ENSMUST00000157365 128 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm23671-201ENSMUST00000157472 103 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm24960-201ENSMUST00000157923 90 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm24080-201ENSMUST00000175178 232 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm18397-201ENSMUST00000176704 587 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Mir6411-201ENSMUST00000183556 108 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm19637-201ENSMUST00000185933 579 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm19498-201ENSMUST00000191128 331 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm37097-201ENSMUST00000193676 336 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm44425-201ENSMUST00000203739 429 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm7380-201ENSMUST00000211599 466 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 487.4 ms