Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.03□□□□□ -1.76
Ubfd1Q78JW9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ubfd1Q78JW9 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm15151-201ENSMUST00000117106 177 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm12311-201ENSMUST00000118803 374 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm12900-201ENSMUST00000120919 573 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm11430-201ENSMUST00000121317 217 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm24961-201ENSMUST00000157918 184 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm4076-201ENSMUST00000179230 965 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Mir6907-201ENSMUST00000183764 71 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm8392-201ENSMUST00000185647 835 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm28623-201ENSMUST00000187219 192 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm42850-201ENSMUST00000202094 201 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm22508-201ENSMUST00000082772 110 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm22229-201ENSMUST00000082987 108 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm25859-201ENSMUST00000083710 91 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.02□□□□□ -1.77
Ubfd1Q78JW9 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm23577-201ENSMUST00000103950 110 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm5757-201ENSMUST00000117494 528 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm11408-201ENSMUST00000117889 519 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm12878-201ENSMUST00000118744 332 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm11420-201ENSMUST00000120047 402 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm4916-201ENSMUST00000126139 642 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm17538-201ENSMUST00000168236 327 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Mir3964-201ENSMUST00000174898 74 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm25999-201ENSMUST00000175398 133 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm22851-201ENSMUST00000178741 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm25074-201ENSMUST00000178782 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm27477-201ENSMUST00000184649 143 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm27952-201ENSMUST00000184748 105 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm5116-201ENSMUST00000187732 463 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm29627-201ENSMUST00000187984 463 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm37757-201ENSMUST00000193072 210 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm43649-201ENSMUST00000196596 391 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm43424-201ENSMUST00000200484 253 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm44274-201ENSMUST00000203417 256 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm44754-201ENSMUST00000208155 400 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm29809-201ENSMUST00000218423 493 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm5374-201ENSMUST00000222868 657 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Snord38a-201ENSMUST00000083746 71 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.01□□□□□ -1.77
Ubfd1Q78JW9 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ubfd1Q78JW9 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms