Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Mir6385-201ENSMUST00000184295 105 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm8600-201ENSMUST00000186320 905 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm29263-201ENSMUST00000188718 463 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm28437-201ENSMUST00000190277 783 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm37239-201ENSMUST00000193510 141 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm5551-201ENSMUST00000199720 690 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm24950-201ENSMUST00000082768 191 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm23971-201ENSMUST00000083317 191 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm23849-201ENSMUST00000083833 191 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm26316-201ENSMUST00000083886 191 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Smarca1Q6PGB8 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm15613-201ENSMUST00000118396 326 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm22480-201ENSMUST00000122568 128 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm22769-201ENSMUST00000158367 98 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm18396-201ENSMUST00000177095 361 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm26960-201ENSMUST00000182263 412 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm27189-201ENSMUST00000184119 190 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm37001-201ENSMUST00000193377 190 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm44720-201ENSMUST00000206076 260 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm18672-201ENSMUST00000208035 270 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm5265-201ENSMUST00000076828 342 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Gm24626-201ENSMUST00000082621 161 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Smarca1Q6PGB8 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm14899-201ENSMUST00000118673 548 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm11600-201ENSMUST00000119592 240 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm11321-201ENSMUST00000121257 902 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm12706-201ENSMUST00000121588 698 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm13868-201ENSMUST00000122411 294 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm24910-201ENSMUST00000157289 272 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm22765-201ENSMUST00000158371 128 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm24550-201ENSMUST00000158648 279 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm22531-201ENSMUST00000158819 140 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm17183-201ENSMUST00000171170 493 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm20693-201ENSMUST00000177431 211 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm26177-201ENSMUST00000178683 107 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm29550-201ENSMUST00000185543 285 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm28666-201ENSMUST00000186649 274 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm19066-201ENSMUST00000193232 1078 ntBASIC4.16□□□□□ -1.74
Smarca1Q6PGB8 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms