Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm19418-201ENSMUST00000197436 580 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm45498-201ENSMUST00000210346 283 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm6056-201ENSMUST00000221253 488 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm46997-201ENSMUST00000222108 217 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm22997-201ENSMUST00000082845 107 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Scaf4Q6PFF0 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm12062-201ENSMUST00000117533 259 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm14107-201ENSMUST00000117774 330 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm12231-201ENSMUST00000119447 695 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm7953-201ENSMUST00000168278 469 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Mir7687-201ENSMUST00000184722 59 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm42566-201ENSMUST00000197120 643 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm10038-201ENSMUST00000077233 441 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Gm24457-201ENSMUST00000083196 105 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.59□□□□□ -1.67
Scaf4Q6PFF0 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Scaf4Q6PFF0 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Scaf4Q6PFF0 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Scaf4Q6PFF0 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Scaf4Q6PFF0 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24689-201ENSMUST00000157760 104 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24240-201ENSMUST00000157785 135 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm23078-201ENSMUST00000157848 148 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24965-201ENSMUST00000157922 106 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm16545-201ENSMUST00000161968 463 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24100-201ENSMUST00000178592 79 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24137-201ENSMUST00000180055 79 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm22263-201ENSMUST00000180060 104 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm24518-201ENSMUST00000180275 94 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm22391-201ENSMUST00000180356 79 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29512-201ENSMUST00000185544 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28110-201ENSMUST00000185782 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28838-201ENSMUST00000186338 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29057-201ENSMUST00000186468 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29661-201ENSMUST00000186781 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28737-201ENSMUST00000186808 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29118-201ENSMUST00000186908 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28433-201ENSMUST00000187085 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29635-201ENSMUST00000187221 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28759-201ENSMUST00000187621 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28831-201ENSMUST00000187739 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28200-201ENSMUST00000187778 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29026-201ENSMUST00000187787 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28752-201ENSMUST00000188340 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28797-201ENSMUST00000188543 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28855-201ENSMUST00000188680 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29378-201ENSMUST00000188723 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28569-201ENSMUST00000188748 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28120-201ENSMUST00000188812 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28369-201ENSMUST00000188993 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29037-201ENSMUST00000189092 313 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28909-201ENSMUST00000189406 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28705-201ENSMUST00000189548 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28861-201ENSMUST00000189681 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29180-201ENSMUST00000190003 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28939-201ENSMUST00000190351 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm28223-201ENSMUST00000190469 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29575-201ENSMUST00000190597 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29092-201ENSMUST00000190768 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm29469-201ENSMUST00000191448 315 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm37636-201ENSMUST00000193583 359 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm44322-201ENSMUST00000196830 115 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm43286-201ENSMUST00000197420 424 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm44348-201ENSMUST00000200165 122 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm44816-201ENSMUST00000206666 477 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms