Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm27271-201ENSMUST00000183509 170 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Gm19177-201ENSMUST00000204520 613 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Gm45735-201ENSMUST00000212779 319 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 AC126673.3-201ENSMUST00000223414 3829 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col7a1Q63870 Gm6757-201ENSMUST00000189810 1706 ntBASIC1.96□□□□□ -2.1
Col7a1Q63870 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm13349-201ENSMUST00000118436 411 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm24675-201ENSMUST00000158757 259 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm18984-201ENSMUST00000193998 1124 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm22155-201ENSMUST00000083836 162 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm24076-201ENSMUST00000158179 94 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Gm7204-201ENSMUST00000062591 600 ntBASIC1.95□□□□□ -2.1
Col7a1Q63870 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col7a1Q63870 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm28975-201ENSMUST00000186412 686 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm23447-201ENSMUST00000082798 163 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm22864-201ENSMUST00000083950 130 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 AC160130.1-201ENSMUST00000220734 2735 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm14794-201ENSMUST00000118181 192 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm6797-201ENSMUST00000119440 512 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm6615-201ENSMUST00000199426 631 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm43929-201ENSMUST00000203025 409 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm44533-201ENSMUST00000207782 268 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 AC134420.1-201ENSMUST00000227027 289 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm25807-201ENSMUST00000122783 305 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Gm22683-201ENSMUST00000082854 137 ntBASIC1.94□□□□□ -2.1
Col7a1Q63870 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col7a1Q63870 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm37158-201ENSMUST00000191652 5704 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms