Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm29647-201ENSMUST00000188795 666 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm28337-201ENSMUST00000190425 666 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm28504-201ENSMUST00000190977 666 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm31511-201ENSMUST00000193134 657 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm35843-201ENSMUST00000193716 666 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm34015-201ENSMUST00000194908 451 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm45539-201ENSMUST00000210313 428 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm18507-201ENSMUST00000218855 525 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm24928-201ENSMUST00000083399 107 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm25897-201ENSMUST00000083709 107 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CtcfQ61164 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm23697-201ENSMUST00000103897 110 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm24792-201ENSMUST00000104286 128 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm14837-201ENSMUST00000119688 206 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm11692-201ENSMUST00000122121 902 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.12□□□□□ -1.75
CtcfQ61164 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm25883-201ENSMUST00000157781 271 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm17030-201ENSMUST00000167016 393 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcfQ61164 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.12□□□□□ -1.75
CtcfQ61164 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm27580-201ENSMUST00000183666 149 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm18185-201ENSMUST00000186725 667 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm28267-201ENSMUST00000191093 265 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Mir7682-201ENSMUST00000198467 58 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm42818-201ENSMUST00000198869 987 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm17989-201ENSMUST00000211543 412 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.12□□□□□ -1.75
CtcfQ61164 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcfQ61164 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.12□□□□□ -1.75
CtcfQ61164 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcfQ61164 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcfQ61164 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcfQ61164 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcfQ61164 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm25420-201ENSMUST00000104216 127 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm12982-201ENSMUST00000117408 190 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm13603-201ENSMUST00000119404 83 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm16327-201ENSMUST00000137146 228 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm23981-201ENSMUST00000157136 106 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm26148-201ENSMUST00000157430 68 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm23269-201ENSMUST00000178701 107 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Mir7014-201ENSMUST00000183853 63 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm7654-201ENSMUST00000186738 683 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Trbv22-201ENSMUST00000191697 291 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm17829-201ENSMUST00000219782 344 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm25592-201ENSMUST00000082635 131 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm22868-201ENSMUST00000083955 164 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CtcfQ61164 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcfQ61164 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcfQ61164 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.11□□□□□ -1.75
CtcfQ61164 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcfQ61164 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm45872-201ENSMUST00000209804 1584 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms