Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.04□□□□□ -1.92
Usf1Q61069 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Usf1Q61069 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Usf1Q61069 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Usf1Q61069 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm2348-201ENSMUST00000108782 300 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm12509-201ENSMUST00000118033 609 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm14517-201ENSMUST00000119040 337 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm25883-201ENSMUST00000157781 271 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Usf1Q61069 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm20574-201ENSMUST00000182867 917 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm29259-201ENSMUST00000186396 694 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm38018-201ENSMUST00000195651 540 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm5551-201ENSMUST00000199720 690 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm44634-201ENSMUST00000206119 152 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm45400-201ENSMUST00000211603 653 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm46194-201ENSMUST00000218136 320 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Usf1Q61069 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Usf1Q61069 Gm24950-201ENSMUST00000082768 191 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm23971-201ENSMUST00000083317 191 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm24928-201ENSMUST00000083399 107 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm25897-201ENSMUST00000083709 107 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm23849-201ENSMUST00000083833 191 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm26316-201ENSMUST00000083886 191 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm10242-201ENSMUST00000090064 330 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Gm8074-201ENSMUST00000095071 252 ntBASIC3.03□□□□□ -1.92
Usf1Q61069 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Usf1Q61069 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Usf1Q61069 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Usf1Q61069 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Usf1Q61069 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Usf1Q61069 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Usf1Q61069 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Usf1Q61069 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.02□□□□□ -1.93
Usf1Q61069 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
Usf1Q61069 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm23256-201ENSMUST00000102235 110 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Mir1195-201ENSMUST00000116818 98 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Mir1198-201ENSMUST00000116995 121 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm12515-201ENSMUST00000120116 361 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm16363-201ENSMUST00000132460 877 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm24060-201ENSMUST00000157494 95 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm22011-201ENSMUST00000158790 123 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm16236-201ENSMUST00000159588 379 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm4207-201ENSMUST00000173144 960 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm22908-201ENSMUST00000177620 110 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.02□□□□□ -1.93
Usf1Q61069 Gm29460-201ENSMUST00000188607 714 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm28155-201ENSMUST00000191066 151 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.02□□□□□ -1.93
Usf1Q61069 Gm19253-201ENSMUST00000204279 307 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Usf1Q61069 Gm8423-201ENSMUST00000211387 607 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm30674-201ENSMUST00000214523 392 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Usf1Q61069 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Usf1Q61069 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Usf1Q61069 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Usf1Q61069 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.02□□□□□ -1.93
Usf1Q61069 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm14879-201ENSMUST00000117308 507 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm14880-201ENSMUST00000117581 292 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm7071-201ENSMUST00000120458 462 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm9001-201ENSMUST00000121642 399 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm24787-201ENSMUST00000157380 123 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm22722-201ENSMUST00000157467 132 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm22833-201ENSMUST00000158292 132 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Mir3965-201ENSMUST00000175570 69 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm24754-201ENSMUST00000177997 107 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm27964-201ENSMUST00000185195 62 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm44399-201ENSMUST00000205043 226 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm18410-201ENSMUST00000207199 577 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm45316-201ENSMUST00000210128 162 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms