Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm11356-201ENSMUST00000118974 192 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24138-201ENSMUST00000157572 114 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7582-201ENSMUST00000160831 603 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17166-201ENSMUST00000172006 431 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm21638-201ENSMUST00000179473 836 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Mir6405-201ENSMUST00000184584 124 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm28358-202ENSMUST00000189292 223 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm18747-201ENSMUST00000198129 648 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17838-201ENSMUST00000205872 876 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45034-201ENSMUST00000206831 482 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45742-201ENSMUST00000212400 433 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm6841-201ENSMUST00000220602 598 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25699-201ENSMUST00000082896 167 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23297-201ENSMUST00000083184 127 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm3940-201ENSMUST00000105087 432 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm13329-201ENSMUST00000117063 265 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm12492-201ENSMUST00000117665 564 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14795-201ENSMUST00000118461 471 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm6265-201ENSMUST00000149263 231 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24443-201ENSMUST00000157242 132 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm18403-201ENSMUST00000192907 529 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm44348-201ENSMUST00000200165 122 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45588-201ENSMUST00000211213 630 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Mir878-201ENSMUST00000104680 78 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm2318-201ENSMUST00000119623 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm2005-201ENSMUST00000120759 542 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm16458-201ENSMUST00000121428 502 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7438-201ENSMUST00000177664 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7408-201ENSMUST00000178014 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7386-201ENSMUST00000178020 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm3657-201ENSMUST00000178170 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7415-201ENSMUST00000178205 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7398-201ENSMUST00000178589 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7391-201ENSMUST00000178680 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7375-201ENSMUST00000179232 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm3681-201ENSMUST00000179940 639 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm29452-201ENSMUST00000187996 313 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm28860-201ENSMUST00000188103 313 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm19641-201ENSMUST00000188432 417 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43217-201ENSMUST00000199513 367 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24446-201ENSMUST00000083982 156 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms