Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm44349-201ENSMUST00000197048 123 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm43897-201ENSMUST00000204019 309 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.21□□□□□ -1.9
Usp28Q5I043 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm22829-201ENSMUST00000083771 106 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usp28Q5I043 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp28Q5I043 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm13349-201ENSMUST00000118436 411 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm15193-201ENSMUST00000120224 865 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm12881-201ENSMUST00000121191 203 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm13676-201ENSMUST00000122185 591 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm24443-201ENSMUST00000157242 132 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm3851-201ENSMUST00000168653 318 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm3010-201ENSMUST00000198805 448 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.2□□□□□ -1.9
Usp28Q5I043 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.2□□□□□ -1.9
Usp28Q5I043 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Usp28Q5I043 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Mir350-201ENSMUST00000083639 99 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm23104-201ENSMUST00000083722 104 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp28Q5I043 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp28Q5I043 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.2□□□□□ -1.9
Usp28Q5I043 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm8569-201ENSMUST00000117630 647 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm14142-201ENSMUST00000117833 296 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm11881-201ENSMUST00000119408 572 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm14939-201ENSMUST00000120347 680 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm7071-201ENSMUST00000120458 462 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm14578-201ENSMUST00000122166 391 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm24840-201ENSMUST00000122603 147 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm23168-201ENSMUST00000157156 143 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm24061-201ENSMUST00000157489 120 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm24876-201ENSMUST00000158780 92 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm16147-201ENSMUST00000162143 373 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm20673-201ENSMUST00000177167 430 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm26991-201ENSMUST00000180950 620 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Mir6926-201ENSMUST00000184562 68 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm44118-201ENSMUST00000204665 229 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm22245-201ENSMUST00000082479 103 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Olfr203-201ENSMUST00000089305 924 ntBASIC3.19□□□□□ -1.9
Usp28Q5I043 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp28Q5I043 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp28Q5I043 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm24096-201ENSMUST00000103905 110 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Mir294-201ENSMUST00000104710 84 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usp28Q5I043 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Usp28Q5I043 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm11898-201ENSMUST00000117161 385 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm13504-201ENSMUST00000117490 316 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm14363-201ENSMUST00000122304 409 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm25807-201ENSMUST00000122783 305 ntBASIC3.18□□□□□ -1.9
Usp28Q5I043 Gm25292-201ENSMUST00000122797 322 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms