Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Trbv27-201ENSMUST00000193711 277 ntBASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Mir497-201ENSMUST00000200557 84 ntBASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Gm22971-201ENSMUST00000083305 97 ntBASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shank3Q4ACU6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm44408-201ENSMUST00000200205 66 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm7974-201ENSMUST00000117154 408 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm13756-201ENSMUST00000117618 222 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm16017-201ENSMUST00000119834 208 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm11446-201ENSMUST00000121319 866 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm22257-201ENSMUST00000158687 301 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm16111-201ENSMUST00000162128 285 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm27786-201ENSMUST00000184337 70 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm45380-201ENSMUST00000210465 315 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm19885-201ENSMUST00000212853 343 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Gm24207-201ENSMUST00000082781 108 ntBASIC3.24□□□□□ -1.89
Shank3Q4ACU6 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Mir344e-201ENSMUST00000104677 66 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm22226-201ENSMUST00000157355 109 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm22330-201ENSMUST00000158068 115 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm28788-201ENSMUST00000189717 375 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm29558-201ENSMUST00000190134 375 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm37579-201ENSMUST00000194291 142 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm43894-201ENSMUST00000203274 688 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm43922-201ENSMUST00000205071 328 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Gm5175-202ENSMUST00000219699 529 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Shank3Q4ACU6 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm23010-201ENSMUST00000104151 126 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm14125-201ENSMUST00000113442 680 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm28637-201ENSMUST00000179424 345 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm11285-201ENSMUST00000118443 322 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm7421-201ENSMUST00000119298 639 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm7365-201ENSMUST00000120877 639 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm13555-201ENSMUST00000121668 319 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm15530-201ENSMUST00000122206 555 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Gm12443-201ENSMUST00000122308 323 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shank3Q4ACU6 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms