Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Snord15a-201ENSMUST00000083888 148 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm12782-201ENSMUST00000117519 727 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm11268-201ENSMUST00000118347 267 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm11943-201ENSMUST00000119473 327 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm22816-201ENSMUST00000157450 117 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm25999-201ENSMUST00000175398 133 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Mir6414-201ENSMUST00000183685 82 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm37946-201ENSMUST00000192064 347 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm43104-201ENSMUST00000197234 311 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm18691-201ENSMUST00000203593 872 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm45209-201ENSMUST00000207122 353 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm18015-201ENSMUST00000214879 316 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm35405-201ENSMUST00000218754 400 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim40Q3UWA4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm24951-201ENSMUST00000102182 109 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm22269-201ENSMUST00000104002 130 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm16082-201ENSMUST00000115992 377 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm14578-201ENSMUST00000122166 391 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm23228-201ENSMUST00000157296 270 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm23365-201ENSMUST00000175019 125 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm25960-201ENSMUST00000175110 125 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm44453-201ENSMUST00000175161 126 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm25195-201ENSMUST00000177656 126 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm8296-201ENSMUST00000185597 524 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm37001-201ENSMUST00000193377 190 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm43559-201ENSMUST00000198755 466 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm34701-202ENSMUST00000204685 360 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm46136-201ENSMUST00000214730 565 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm24035-201ENSMUST00000082867 107 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim40Q3UWA4 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Mir599-201ENSMUST00000102378 88 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm25213-201ENSMUST00000102388 113 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Mir667-201ENSMUST00000102441 92 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm24120-201ENSMUST00000103978 129 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm14880-201ENSMUST00000117581 292 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms