Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm11874-201ENSMUST00000117437 130 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm14299-201ENSMUST00000117586 397 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm13607-201ENSMUST00000117875 539 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm13737-201ENSMUST00000119793 232 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm14240-201ENSMUST00000120353 546 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm15244-201ENSMUST00000121122 130 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm24550-201ENSMUST00000158648 279 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm3111-201ENSMUST00000167426 490 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm10067-201ENSMUST00000179462 348 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Mir7031-201ENSMUST00000183860 65 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28574-201ENSMUST00000185757 699 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28781-201ENSMUST00000185760 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28339-201ENSMUST00000185845 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29574-201ENSMUST00000186226 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28828-201ENSMUST00000186601 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28057-201ENSMUST00000186603 615 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29307-201ENSMUST00000187367 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28397-201ENSMUST00000187970 699 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28896-201ENSMUST00000188609 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29545-201ENSMUST00000188878 694 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29339-201ENSMUST00000189613 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28159-201ENSMUST00000190296 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29366-201ENSMUST00000190481 699 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm29407-201ENSMUST00000191468 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm37692-201ENSMUST00000192633 232 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm37433-201ENSMUST00000192695 678 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm18900-201ENSMUST00000193218 584 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm37441-201ENSMUST00000194430 678 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm38107-201ENSMUST00000194873 696 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm9068-201ENSMUST00000217393 455 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm17829-201ENSMUST00000219782 344 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Brf2Q3UAW9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Brf2Q3UAW9 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.59□□□□□ -1.84
Brf2Q3UAW9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Brf2Q3UAW9 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm11923-201ENSMUST00000118135 508 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm13349-201ENSMUST00000118436 411 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm14301-201ENSMUST00000120181 324 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm11358-201ENSMUST00000122310 373 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm25605-201ENSMUST00000158364 124 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm25365-201ENSMUST00000158852 121 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm24976-201ENSMUST00000158972 135 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm5372-201ENSMUST00000187540 409 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm29576-201ENSMUST00000188020 678 ntBASIC3.58□□□□□ -1.84
Brf2Q3UAW9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms