Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm10161-201ENSMUST00000091506 204 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm24608-201ENSMUST00000104381 136 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm14825-201ENSMUST00000113538 701 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm13482-201ENSMUST00000119842 254 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm24836-201ENSMUST00000122609 108 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm23118-201ENSMUST00000122657 187 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm2020-201ENSMUST00000145242 579 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm22755-201ENSMUST00000157143 100 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm26177-201ENSMUST00000178683 107 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm7654-201ENSMUST00000186738 683 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm29668-201ENSMUST00000187802 315 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm42818-201ENSMUST00000198869 987 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm36776-201ENSMUST00000207006 203 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm18672-201ENSMUST00000208035 270 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddb1Q3U1J4 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.96□□□□□ -1.61
Ddb1Q3U1J4 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Ddb1Q3U1J4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm11219-201ENSMUST00000118565 358 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm24627-201ENSMUST00000122764 138 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm22765-201ENSMUST00000158371 128 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Mir6341-201ENSMUST00000183490 121 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm43578-201ENSMUST00000201250 459 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm45048-201ENSMUST00000207058 429 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm9712-201ENSMUST00000210842 311 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm5917-201ENSMUST00000217638 721 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm20304-201ENSMUST00000218168 444 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm16261-201ENSMUST00000096813 205 ntBASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddb1Q3U1J4 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm15025-201ENSMUST00000118434 418 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm14837-201ENSMUST00000119688 206 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm16134-201ENSMUST00000161714 336 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm5552-201ENSMUST00000197149 515 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm35876-201ENSMUST00000205044 459 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms