Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm2005-201ENSMUST00000120759 542 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm22561-201ENSMUST00000157331 84 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm24061-201ENSMUST00000157489 120 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm22769-201ENSMUST00000158367 98 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm6900-201ENSMUST00000178971 342 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm14527-201ENSMUST00000179300 639 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm27308-201ENSMUST00000184807 233 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm8600-201ENSMUST00000186320 905 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CiitaP79621 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.87□□□□□ -1.79
CiitaP79621 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm42832-201ENSMUST00000196361 745 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm44720-201ENSMUST00000206076 260 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm45080-201ENSMUST00000206648 283 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CiitaP79621 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.87□□□□□ -1.79
CiitaP79621 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.87□□□□□ -1.79
CiitaP79621 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.87□□□□□ -1.79
CiitaP79621 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.87□□□□□ -1.79
CiitaP79621 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Gm10161-201ENSMUST00000091506 204 ntBASIC3.87□□□□□ -1.79
CiitaP79621 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CiitaP79621 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CiitaP79621 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CiitaP79621 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CiitaP79621 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CiitaP79621 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CiitaP79621 Gm12722-201ENSMUST00000118507 493 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm16445-201ENSMUST00000120399 714 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm5646-201ENSMUST00000120568 714 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.86□□□□□ -1.79
CiitaP79621 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm22034-201ENSMUST00000157283 134 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm22380-201ENSMUST00000157479 95 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm27592-201ENSMUST00000157729 126 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm22174-201ENSMUST00000175050 125 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm22692-201ENSMUST00000175055 125 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm27634-201ENSMUST00000175060 126 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm22460-201ENSMUST00000175269 124 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm25535-201ENSMUST00000175364 125 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm24365-201ENSMUST00000175384 125 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm44310-201ENSMUST00000175424 126 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm22639-201ENSMUST00000175591 125 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm24979-201ENSMUST00000178626 126 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm27743-201ENSMUST00000185136 126 ntBASIC3.86□□□□□ -1.79
CiitaP79621 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CiitaP79621 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm18748-201ENSMUST00000198507 622 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm44824-201ENSMUST00000207021 229 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm46136-201ENSMUST00000214730 565 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm21007-201ENSMUST00000221024 326 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
CiitaP79621 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm24622-201ENSMUST00000082619 162 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Gm24446-201ENSMUST00000083982 156 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CiitaP79621 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.86□□□□□ -1.79
CiitaP79621 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CiitaP79621 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CiitaP79621 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CiitaP79621 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CiitaP79621 Gm13076-201ENSMUST00000118041 204 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm14007-201ENSMUST00000118288 210 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm5762-201ENSMUST00000119204 258 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm11693-201ENSMUST00000119625 565 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm14739-201ENSMUST00000120424 802 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm23463-201ENSMUST00000122468 99 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm23234-201ENSMUST00000157304 134 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm23473-201ENSMUST00000158883 116 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.85□□□□□ -1.79
CiitaP79621 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.85□□□□□ -1.79
CiitaP79621 Mir6408-201ENSMUST00000183643 91 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28574-201ENSMUST00000185757 699 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28781-201ENSMUST00000185760 696 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28339-201ENSMUST00000185845 696 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm29062-201ENSMUST00000186032 694 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm29574-201ENSMUST00000186226 696 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28828-201ENSMUST00000186601 696 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28057-201ENSMUST00000186603 615 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm29307-201ENSMUST00000187367 696 ntBASIC3.85□□□□□ -1.79
CiitaP79621 Gm28397-201ENSMUST00000187970 699 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms