Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14129-201ENSMUST00000122436 291 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm22597-201ENSMUST00000157602 80 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm26354-201ENSMUST00000158221 129 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm7094-201ENSMUST00000178379 366 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm11394-201ENSMUST00000181421 517 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm28283-201ENSMUST00000185509 178 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm28418-201ENSMUST00000186179 423 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm28785-201ENSMUST00000187478 379 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm28098-201ENSMUST00000191361 699 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm8747-201ENSMUST00000195392 751 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm44718-201ENSMUST00000206886 359 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm45402-201ENSMUST00000211796 223 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm18016-201ENSMUST00000216119 801 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm25008-201ENSMUST00000083809 81 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
Shmt1P50431 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Shmt1P50431 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.49□□□□□ -1.69
Shmt1P50431 Snora64-201ENSMUST00000104521 134 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm11372-201ENSMUST00000117348 570 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm12261-201ENSMUST00000117499 645 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm14669-201ENSMUST00000118841 250 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm14656-201ENSMUST00000120342 502 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm13677-201ENSMUST00000120739 595 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm25908-201ENSMUST00000157624 98 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Shmt1P50431 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.49□□□□□ -1.69
Shmt1P50431 Mir6907-201ENSMUST00000183764 71 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm38270-201ENSMUST00000192721 407 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm35702-201ENSMUST00000198653 511 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm45173-201ENSMUST00000206819 305 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Gm44765-201ENSMUST00000206927 601 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.49□□□□□ -1.69
Shmt1P50431 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.49□□□□□ -1.69
Shmt1P50431 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.49□□□□□ -1.69
Shmt1P50431 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm4017-201ENSMUST00000084813 338 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Shmt1P50431 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Shmt1P50431 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.49□□□□□ -1.69
Shmt1P50431 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Shmt1P50431 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm26019-201ENSMUST00000104407 119 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm14681-201ENSMUST00000118047 411 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.48□□□□□ -1.69
Shmt1P50431 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm25386-201ENSMUST00000157814 288 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm8532-201ENSMUST00000179174 461 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm27899-201ENSMUST00000184715 64 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm29045-201ENSMUST00000187278 698 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm28069-201ENSMUST00000189926 214 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm30280-201ENSMUST00000192214 262 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm18403-201ENSMUST00000192907 529 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm2077-201ENSMUST00000195017 319 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm43083-201ENSMUST00000199594 476 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm44142-201ENSMUST00000203358 311 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm7692-201ENSMUST00000213534 409 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms