Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm44927-201ENSMUST00000207573 716 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm8745-201ENSMUST00000207846 782 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm44959-201ENSMUST00000209127 231 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx1P48377 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Rfx1P48377 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx1P48377 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx1P48377 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx1P48377 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Rfx1P48377 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx1P48377 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.59□□□□□ -1.52
Rfx1P48377 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rfx1P48377 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.58□□□□□ -1.52
Rfx1P48377 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm26278-201ENSMUST00000157098 132 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm16318-201ENSMUST00000162402 601 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm3531-201ENSMUST00000162698 489 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm29159-201ENSMUST00000187969 379 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm28654-201ENSMUST00000189801 379 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm21088-201ENSMUST00000190875 316 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm43304-201ENSMUST00000196803 326 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm44336-201ENSMUST00000203696 468 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Gm45327-201ENSMUST00000211612 565 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Mir134-201ENSMUST00000083492 71 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Mir337-201ENSMUST00000083592 97 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rfx1P48377 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.58□□□□□ -1.52
Rfx1P48377 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rfx1P48377 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Rfx1P48377 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Rfx1P48377 Gm13250-201ENSMUST00000117209 753 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm11577-201ENSMUST00000118030 737 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm15037-201ENSMUST00000120358 259 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.57□□□□□ -1.52
Rfx1P48377 Gm25624-201ENSMUST00000157222 275 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm22917-201ENSMUST00000180116 110 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm19427-201ENSMUST00000183619 208 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.57□□□□□ -1.52
Rfx1P48377 Mir6372-201ENSMUST00000185114 109 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm29350-201ENSMUST00000189141 541 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm9722-201ENSMUST00000194568 802 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm42814-201ENSMUST00000199370 460 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm44063-201ENSMUST00000203307 376 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm18306-201ENSMUST00000207338 569 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Gm23932-201ENSMUST00000082914 107 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rfx1P48377 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Rfx1P48377 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Rfx1P48377 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.57□□□□□ -1.52
Rfx1P48377 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rfx1P48377 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Rfx1P48377 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rfx1P48377 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Rfx1P48377 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rfx1P48377 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm13510-201ENSMUST00000118659 429 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm11481-201ENSMUST00000120069 255 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm24504-201ENSMUST00000157679 100 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm15914-201ENSMUST00000161922 309 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm27492-201ENSMUST00000185194 187 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm3145-201ENSMUST00000188584 220 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm43355-201ENSMUST00000196541 346 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm17811-201ENSMUST00000206193 387 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms