Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm23967-201ENSMUST00000175062 78 ntBASIC2.46□□□□□ -2.02
HttP42859 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HttP42859 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.46□□□□□ -2.02
HttP42859 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HttP42859 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.46□□□□□ -2.02
HttP42859 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HttP42859 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.46□□□□□ -2.02
HttP42859 Gm16232-201ENSMUST00000162856 167 ntBASIC2.46□□□□□ -2.02
HttP42859 Gm37455-201ENSMUST00000191993 529 ntBASIC2.46□□□□□ -2.02
HttP42859 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HttP42859 Gm18359-201ENSMUST00000173024 1459 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.45□□□□□ -2.02
HttP42859 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.45□□□□□ -2.02
HttP42859 Gm27648-201ENSMUST00000184315 107 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.45□□□□□ -2.02
HttP42859 Gm44343-201ENSMUST00000196702 90 ntBASIC2.45□□□□□ -2.02
HttP42859 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HttP42859 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HttP42859 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HttP42859 Gm27894-201ENSMUST00000184177 92 ntBASIC2.45□□□□□ -2.02
HttP42859 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.45□□□□□ -2.02
HttP42859 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm26449-201ENSMUST00000082452 104 ntBASIC2.45□□□□□ -2.02
HttP42859 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.45□□□□□ -2.02
HttP42859 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm25274-201ENSMUST00000104296 135 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm25807-201ENSMUST00000122783 305 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HttP42859 Trbv22-201ENSMUST00000191697 291 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Gm4263-202ENSMUST00000221392 667 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HttP42859 Gm28794-201ENSMUST00000185276 136 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm6615-201ENSMUST00000199426 631 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm25581-201ENSMUST00000083410 164 ntBASIC2.44□□□□□ -2.02
HttP42859 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HttP42859 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 Gm12814-201ENSMUST00000117091 846 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm3030-201ENSMUST00000163410 516 ntBASIC2.44□□□□□ -2.02
HttP42859 Mir7679-201ENSMUST00000183379 63 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm38330-201ENSMUST00000192743 959 ntBASIC2.44□□□□□ -2.02
HttP42859 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HttP42859 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.44□□□□□ -2.02
HttP42859 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HttP42859 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HttP42859 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC2.43□□□□□ -2.02
HttP42859 Mir1946a-201ENSMUST00000158360 134 ntBASIC2.43□□□□□ -2.02
HttP42859 Gm24736-201ENSMUST00000158862 130 ntBASIC2.43□□□□□ -2.02
HttP42859 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2.43□□□□□ -2.02
HttP42859 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.43□□□□□ -2.02
HttP42859 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HttP42859 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HttP42859 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC2.43□□□□□ -2.02
HttP42859 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.43□□□□□ -2.02
HttP42859 Gm12495-201ENSMUST00000119750 447 ntBASIC2.43□□□□□ -2.02
HttP42859 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.43□□□□□ -2.02
HttP42859 Gm14768-201ENSMUST00000122126 678 ntBASIC2.43□□□□□ -2.02
HttP42859 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.43□□□□□ -2.02
HttP42859 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HttP42859 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HttP42859 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HttP42859 AC151831.1-201ENSMUST00000227609 4033 ntBASIC2.43□□□□□ -2.02
HttP42859 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HttP42859 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HttP42859 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.42□□□□□ -2.02
HttP42859 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.42□□□□□ -2.02
HttP42859 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.42□□□□□ -2.02
HttP42859 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.42□□□□□ -2.02
HttP42859 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.42□□□□□ -2.02
HttP42859 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Gm23600-201ENSMUST00000157260 71 ntBASIC2.42□□□□□ -2.02
HttP42859 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HttP42859 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.42□□□□□ -2.02
HttP42859 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HttP42859 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
HttP42859 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HttP42859 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Gm44220-201ENSMUST00000203784 2487 ntBASIC2.42□□□□□ -2.02
HttP42859 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HttP42859 Gm43406-201ENSMUST00000200356 334 ntBASIC2.42□□□□□ -2.02
HttP42859 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.42□□□□□ -2.02
HttP42859 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.42□□□□□ -2.02
HttP42859 Gm23447-201ENSMUST00000082798 163 ntBASIC2.42□□□□□ -2.02
HttP42859 Gm5653-201ENSMUST00000223393 1337 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms