Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm45146-201ENSMUST00000207108 221 ntBASIC4.04□□□□□ -1.76
Traf1P39428 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 AC158631.1-201ENSMUST00000219202 138 ntBASIC4.04□□□□□ -1.76
Traf1P39428 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.04□□□□□ -1.76
Traf1P39428 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm45130-201ENSMUST00000207574 3388 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Traf1P39428 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm7429-201ENSMUST00000118664 348 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm11693-201ENSMUST00000119625 565 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Traf1P39428 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm6947-201ENSMUST00000186254 78 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm29064-201ENSMUST00000187014 813 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm37576-201ENSMUST00000194228 372 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm43043-201ENSMUST00000196579 412 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm43070-201ENSMUST00000196938 415 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm35558-202ENSMUST00000221819 499 ntBASIC4.03□□□□□ -1.76
Traf1P39428 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.03□□□□□ -1.76
Traf1P39428 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm4987-201ENSMUST00000078326 408 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Traf1P39428 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Traf1P39428 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.03□□□□□ -1.76
Traf1P39428 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Traf1P39428 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm24127-201ENSMUST00000104110 130 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm7974-201ENSMUST00000117154 408 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm12902-201ENSMUST00000118389 322 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm12722-201ENSMUST00000118507 493 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm12788-201ENSMUST00000119090 308 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm12897-201ENSMUST00000120341 250 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm13555-201ENSMUST00000121668 319 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Snrpert-201ENSMUST00000121967 279 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm23592-201ENSMUST00000157859 117 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm23773-201ENSMUST00000158985 296 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Snord92-201ENSMUST00000175548 85 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm28030-201ENSMUST00000184987 138 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm28591-201ENSMUST00000185259 183 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm28314-201ENSMUST00000191276 345 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm18403-201ENSMUST00000192907 529 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm37104-201ENSMUST00000193278 196 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm44395-201ENSMUST00000197056 153 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm43198-201ENSMUST00000200927 326 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.02□□□□□ -1.77
Traf1P39428 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Traf1P39428 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm45912-201ENSMUST00000210646 543 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.02□□□□□ -1.77
Traf1P39428 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Traf1P39428 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Traf1P39428 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Traf1P39428 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.02□□□□□ -1.77
Traf1P39428 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Traf1P39428 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Traf1P39428 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Traf1P39428 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Traf1P39428 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Gm22115-201ENSMUST00000103976 133 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm23923-201ENSMUST00000104108 133 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm15854-201ENSMUST00000118879 808 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm13873-201ENSMUST00000119208 427 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.01□□□□□ -1.77
Traf1P39428 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm23716-201ENSMUST00000157348 144 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm16101-201ENSMUST00000160695 430 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Gm44927-201ENSMUST00000207573 716 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm45312-201ENSMUST00000210566 311 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms