Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm22834-201ENSMUST00000102021 79 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Gm5963-201ENSMUST00000143451 236 ntBASIC4.33□□□□□ -1.72
LdlrP35951 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm6058-201ENSMUST00000154261 399 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm24251-201ENSMUST00000157324 114 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm24507-201ENSMUST00000157683 134 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm25982-201ENSMUST00000157920 101 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm23016-201ENSMUST00000158431 62 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm23579-201ENSMUST00000158528 103 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm20656-201ENSMUST00000176925 518 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.33□□□□□ -1.72
LdlrP35951 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LdlrP35951 Gm10105-201ENSMUST00000184601 270 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm7858-201ENSMUST00000190177 622 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm5731-201ENSMUST00000190969 481 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm28408-201ENSMUST00000191557 463 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm38008-201ENSMUST00000195333 518 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm42566-201ENSMUST00000197120 643 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm43825-201ENSMUST00000199650 734 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Gm17990-201ENSMUST00000211728 553 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.33□□□□□ -1.72
LdlrP35951 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.33□□□□□ -1.72
LdlrP35951 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.33□□□□□ -1.72
LdlrP35951 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LdlrP35951 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LdlrP35951 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.33□□□□□ -1.72
LdlrP35951 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.33□□□□□ -1.72
LdlrP35951 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LdlrP35951 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LdlrP35951 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm22473-201ENSMUST00000104114 132 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm22021-201ENSMUST00000104353 107 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm23178-201ENSMUST00000116782 95 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm13085-201ENSMUST00000118356 171 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm13228-201ENSMUST00000118937 634 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm5060-201ENSMUST00000120072 599 ntBASIC4.32□□□□□ -1.72
LdlrP35951 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm3470-201ENSMUST00000160819 420 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm23047-201ENSMUST00000177661 94 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm28118-201ENSMUST00000185957 294 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm28629-201ENSMUST00000187309 263 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm28785-201ENSMUST00000187478 379 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm29229-201ENSMUST00000188874 323 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm37495-201ENSMUST00000194590 264 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm17954-201ENSMUST00000195893 607 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm43115-201ENSMUST00000196244 160 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm43723-201ENSMUST00000196886 189 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm43804-201ENSMUST00000198280 456 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm43710-201ENSMUST00000199583 452 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
LdlrP35951 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.32□□□□□ -1.72
LdlrP35951 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.32□□□□□ -1.72
LdlrP35951 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.32□□□□□ -1.72
LdlrP35951 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LdlrP35951 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LdlrP35951 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm22508-201ENSMUST00000082772 110 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm23939-201ENSMUST00000082880 133 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm23464-201ENSMUST00000083145 147 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm23679-201ENSMUST00000083161 119 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Gm23460-201ENSMUST00000083258 109 ntBASIC4.32□□□□□ -1.72
LdlrP35951 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LdlrP35951 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LdlrP35951 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.32□□□□□ -1.72
LdlrP35951 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LdlrP35951 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LdlrP35951 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LdlrP35951 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.32□□□□□ -1.72
LdlrP35951 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LdlrP35951 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LdlrP35951 Gm5384-201ENSMUST00000120313 463 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms