Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm24730-201ENSMUST00000158228 117 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Gm28030-201ENSMUST00000184987 138 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Gm29704-201ENSMUST00000196011 253 ntBASIC3.56□□□□□ -1.84
Lire1P11260 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lire1P11260 Gm18672-201ENSMUST00000208035 270 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Gm20948-201ENSMUST00000211091 449 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Gm7380-201ENSMUST00000211599 466 ntBASIC3.56□□□□□ -1.84
Lire1P11260 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.56□□□□□ -1.84
Lire1P11260 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.56□□□□□ -1.84
Lire1P11260 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Lire1P11260 Gm23443-201ENSMUST00000082916 128 ntBASIC3.56□□□□□ -1.84
Lire1P11260 Mir21a-201ENSMUST00000083521 92 ntBASIC3.56□□□□□ -1.84
Lire1P11260 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lire1P11260 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Lire1P11260 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Lire1P11260 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Lire1P11260 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Lire1P11260 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Lire1P11260 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Lire1P11260 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lire1P11260 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Lire1P11260 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm14879-201ENSMUST00000117308 507 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm12706-201ENSMUST00000121588 698 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm12885-201ENSMUST00000122246 328 ntBASIC3.55□□□□□ -1.84
Lire1P11260 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm23753-201ENSMUST00000157575 149 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm24532-201ENSMUST00000157951 286 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm20693-201ENSMUST00000177431 211 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm37708-201ENSMUST00000192337 895 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm42926-201ENSMUST00000200496 697 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm8035-201ENSMUST00000204625 687 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm45226-201ENSMUST00000206602 288 ntBASIC3.55□□□□□ -1.84
Lire1P11260 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.55□□□□□ -1.84
Lire1P11260 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.55□□□□□ -1.84
Lire1P11260 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.55□□□□□ -1.84
Lire1P11260 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lire1P11260 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Lire1P11260 Gm5265-201ENSMUST00000076828 342 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lire1P11260 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.55□□□□□ -1.84
Lire1P11260 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Lire1P11260 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Lire1P11260 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Lire1P11260 Gm26418-201ENSMUST00000104275 137 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm7618-201ENSMUST00000121643 171 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm11692-201ENSMUST00000122121 902 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.54□□□□□ -1.84
Lire1P11260 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Lire1P11260 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm6651-201ENSMUST00000189471 271 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm17838-201ENSMUST00000205872 876 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Gm45105-201ENSMUST00000207824 397 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Gm31849-201ENSMUST00000220306 375 ntBASIC3.54□□□□□ -1.84
Lire1P11260 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.54□□□□□ -1.84
Lire1P11260 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Lire1P11260 Gm26128-201ENSMUST00000083170 110 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Lire1P11260 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.54□□□□□ -1.84
Lire1P11260 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Lire1P11260 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Lire1P11260 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Lire1P11260 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Lire1P11260 Gm24119-201ENSMUST00000103979 246 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Lire1P11260 Gm13454-201ENSMUST00000118166 483 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm14898-201ENSMUST00000120202 645 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm12368-201ENSMUST00000122251 434 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm13424-201ENSMUST00000122301 354 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.53□□□□□ -1.84
Lire1P11260 Gm26148-201ENSMUST00000157430 68 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm27163-201ENSMUST00000184767 409 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.53□□□□□ -1.84
Lire1P11260 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.53□□□□□ -1.84
Lire1P11260 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.53□□□□□ -1.84
Lire1P11260 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Gm7119-201ENSMUST00000221345 695 ntBASIC3.53□□□□□ -1.84
Lire1P11260 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.53□□□□□ -1.84
Lire1P11260 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.53□□□□□ -1.84
Lire1P11260 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Lire1P11260 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Lire1P11260 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms