Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.21□□□□□ -1.74
Hoxd4P10628 Gm25792-201ENSMUST00000083289 100 ntBASIC4.21□□□□□ -1.74
Hoxd4P10628 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.21□□□□□ -1.74
Hoxd4P10628 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxd4P10628 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxd4P10628 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxd4P10628 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxd4P10628 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.2□□□□□ -1.74
Hoxd4P10628 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd4P10628 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm23744-201ENSMUST00000104231 149 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm5757-201ENSMUST00000117494 528 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm14013-201ENSMUST00000119006 270 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm14240-201ENSMUST00000120353 546 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm23993-201ENSMUST00000157478 144 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm27585-201ENSMUST00000183717 199 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Mir6986-201ENSMUST00000184483 58 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm29192-201ENSMUST00000190942 377 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm18100-201ENSMUST00000200897 452 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm45032-201ENSMUST00000205375 520 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm7675-201ENSMUST00000208828 686 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm8288-201ENSMUST00000223406 593 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Snord47-201ENSMUST00000083034 77 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm25008-201ENSMUST00000083809 81 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm25187-201ENSMUST00000083906 133 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd4P10628 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd4P10628 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.2□□□□□ -1.74
Hoxd4P10628 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd4P10628 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd4P10628 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Hoxd4P10628 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm23836-201ENSMUST00000104434 129 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm12255-201ENSMUST00000117184 284 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm14163-201ENSMUST00000117342 217 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm16089-201ENSMUST00000117679 336 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm14774-201ENSMUST00000117857 536 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm13122-201ENSMUST00000118380 453 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm15357-201ENSMUST00000119160 285 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm12379-201ENSMUST00000119607 391 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm15745-201ENSMUST00000119807 115 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm12042-201ENSMUST00000120479 301 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm25383-201ENSMUST00000157810 144 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm9830-201ENSMUST00000178509 357 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm22307-201ENSMUST00000180019 107 ntBASIC4.19□□□□□ -1.74
Hoxd4P10628 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd4P10628 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms