Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm14971-201ENSMUST00000117980 663 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm11577-201ENSMUST00000118030 737 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm14162-201ENSMUST00000121985 601 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm27163-201ENSMUST00000184767 409 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm18645-202ENSMUST00000212222 760 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Mir193a-201ENSMUST00000083461 66 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm12509-201ENSMUST00000118033 609 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm11693-201ENSMUST00000119625 565 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm11575-201ENSMUST00000122243 228 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm8840-201ENSMUST00000122454 386 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm17194-201ENSMUST00000164610 348 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm20651-201ENSMUST00000177219 329 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm22252-201ENSMUST00000179316 79 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm26991-201ENSMUST00000180950 620 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Mir6401-201ENSMUST00000184499 109 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm43239-201ENSMUST00000200131 201 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm19233-201ENSMUST00000219772 936 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Chmp6P0C0A3 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm12137-201ENSMUST00000119565 346 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm24060-201ENSMUST00000157494 95 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm24190-201ENSMUST00000157976 216 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm3470-201ENSMUST00000160819 420 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm6113-201ENSMUST00000180319 639 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm27796-201ENSMUST00000183863 261 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm27715-201ENSMUST00000184714 260 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm43115-201ENSMUST00000196244 160 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm43954-201ENSMUST00000204634 544 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Gm9373-201ENSMUST00000208724 599 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Chmp6P0C0A3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm24376-201ENSMUST00000104399 127 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm13574-201ENSMUST00000120482 394 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm25883-201ENSMUST00000157781 271 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm24213-201ENSMUST00000158255 258 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm18520-201ENSMUST00000174783 658 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms