Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col3a1P08121 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm9427-201ENSMUST00000116187 651 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm13167-201ENSMUST00000118554 578 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm12793-201ENSMUST00000119268 292 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm14982-201ENSMUST00000121102 442 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm12368-201ENSMUST00000122251 434 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm3757-201ENSMUST00000125878 675 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm26215-201ENSMUST00000158584 139 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm22668-201ENSMUST00000158716 260 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm17085-201ENSMUST00000165425 502 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 Mir3092-201ENSMUST00000174954 96 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm24417-201ENSMUST00000178123 79 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm24653-201ENSMUST00000178541 79 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm25934-201ENSMUST00000178642 79 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Mir7j-201ENSMUST00000184427 122 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm28282-201ENSMUST00000186072 186 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm37399-201ENSMUST00000195224 416 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm43472-201ENSMUST00000200175 154 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm44223-201ENSMUST00000204854 114 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm43922-201ENSMUST00000205071 328 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Gm30155-201ENSMUST00000223458 339 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm24817-201ENSMUST00000093672 105 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col3a1P08121 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.94□□□□□ -1.78
Col3a1P08121 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col3a1P08121 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col3a1P08121 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col3a1P08121 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm26423-201ENSMUST00000104277 128 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm14987-201ENSMUST00000117820 676 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm12294-201ENSMUST00000119723 490 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm16021-201ENSMUST00000121176 219 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm9498-201ENSMUST00000140849 291 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm22080-201ENSMUST00000157591 106 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm24734-201ENSMUST00000158860 262 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm17194-201ENSMUST00000164610 348 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Mir6398-201ENSMUST00000184541 102 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm38281-201ENSMUST00000192301 315 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm38109-201ENSMUST00000195386 181 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm25203-202ENSMUST00000200458 216 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm44016-201ENSMUST00000203463 164 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm9375-201ENSMUST00000208899 903 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm5649-201ENSMUST00000217918 951 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm9628-201ENSMUST00000222169 725 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm25203-201ENSMUST00000082842 215 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm26063-201ENSMUST00000083378 107 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col3a1P08121 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col3a1P08121 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Col3a1P08121 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm24835-201ENSMUST00000116777 111 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm14981-201ENSMUST00000117325 943 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm7855-201ENSMUST00000137737 687 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm25373-201ENSMUST00000158156 115 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm26214-201ENSMUST00000158581 107 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm26468-201ENSMUST00000158644 106 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm2855-201ENSMUST00000166765 456 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm17421-201ENSMUST00000167845 674 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm17177-201ENSMUST00000169144 483 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm7870-201ENSMUST00000184467 616 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm28141-201ENSMUST00000186676 342 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms