Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TnfP06804 Gm23583-201ENSMUST00000158533 289 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm26215-201ENSMUST00000158584 139 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.16□□□□□ -1.9
TnfP06804 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TnfP06804 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.16□□□□□ -1.9
TnfP06804 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.16□□□□□ -1.9
TnfP06804 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm17935-201ENSMUST00000196649 772 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.16□□□□□ -1.9
TnfP06804 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm34091-201ENSMUST00000200875 604 ntBASIC3.16□□□□□ -1.9
TnfP06804 Gm6590-201ENSMUST00000203343 687 ntBASIC3.16□□□□□ -1.9
TnfP06804 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TnfP06804 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.16□□□□□ -1.9
TnfP06804 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.16□□□□□ -1.9
TnfP06804 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.16□□□□□ -1.9
TnfP06804 AF357341-201ENSMUST00000083088 75 ntBASIC3.16□□□□□ -1.9
TnfP06804 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.16□□□□□ -1.9
TnfP06804 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TnfP06804 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.16□□□□□ -1.9
TnfP06804 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TnfP06804 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TnfP06804 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.15□□□□□ -1.9
TnfP06804 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TnfP06804 Gm24951-201ENSMUST00000102182 109 ntBASIC3.15□□□□□ -1.91
TnfP06804 Gm25407-201ENSMUST00000104102 134 ntBASIC3.15□□□□□ -1.91
TnfP06804 Gm22478-201ENSMUST00000122570 154 ntBASIC3.15□□□□□ -1.91
TnfP06804 Gm25047-201ENSMUST00000122667 104 ntBASIC3.15□□□□□ -1.91
TnfP06804 Gm22538-201ENSMUST00000158169 299 ntBASIC3.15□□□□□ -1.91
TnfP06804 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 Gm25412-201ENSMUST00000180258 107 ntBASIC3.15□□□□□ -1.91
TnfP06804 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 Gm26928-201ENSMUST00000182674 572 ntBASIC3.15□□□□□ -1.91
TnfP06804 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.15□□□□□ -1.91
TnfP06804 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.15□□□□□ -1.91
TnfP06804 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.15□□□□□ -1.91
TnfP06804 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.15□□□□□ -1.91
TnfP06804 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TnfP06804 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TnfP06804 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TnfP06804 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.15□□□□□ -1.91
TnfP06804 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
TnfP06804 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TnfP06804 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
TnfP06804 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.14□□□□□ -1.91
TnfP06804 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.14□□□□□ -1.91
TnfP06804 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
TnfP06804 Mir291a-201ENSMUST00000104815 82 ntBASIC3.14□□□□□ -1.91
TnfP06804 Gm16363-201ENSMUST00000132460 877 ntBASIC3.14□□□□□ -1.91
TnfP06804 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TnfP06804 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.14□□□□□ -1.91
TnfP06804 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.14□□□□□ -1.91
TnfP06804 Gm6140-201ENSMUST00000192494 966 ntBASIC3.14□□□□□ -1.91
TnfP06804 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.14□□□□□ -1.91
TnfP06804 Gm6842-201ENSMUST00000211361 390 ntBASIC3.14□□□□□ -1.91
TnfP06804 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.14□□□□□ -1.91
TnfP06804 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.14□□□□□ -1.91
TnfP06804 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.14□□□□□ -1.91
TnfP06804 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.14□□□□□ -1.91
TnfP06804 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TnfP06804 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
TnfP06804 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TnfP06804 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TnfP06804 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TnfP06804 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.14□□□□□ -1.91
TnfP06804 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TnfP06804 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TnfP06804 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TnfP06804 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TnfP06804 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TnfP06804 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.13□□□□□ -1.91
TnfP06804 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TnfP06804 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
TnfP06804 Gm23911-201ENSMUST00000104596 134 ntBASIC3.13□□□□□ -1.91
TnfP06804 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.13□□□□□ -1.91
TnfP06804 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TnfP06804 Gm23312-201ENSMUST00000158774 102 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm17166-201ENSMUST00000172006 431 ntBASIC3.13□□□□□ -1.91
TnfP06804 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.13□□□□□ -1.91
TnfP06804 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.13□□□□□ -1.91
TnfP06804 Mir3965-201ENSMUST00000175570 69 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm20612-201ENSMUST00000176318 236 ntBASIC3.13□□□□□ -1.91
TnfP06804 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm44404-201ENSMUST00000203979 636 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm5322-201ENSMUST00000206142 699 ntBASIC3.13□□□□□ -1.91
TnfP06804 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.13□□□□□ -1.91
TnfP06804 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.13□□□□□ -1.91
TnfP06804 Olfr844-201ENSMUST00000054106 930 ntBASIC3.13□□□□□ -1.91
TnfP06804 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TnfP06804 Gm25699-201ENSMUST00000082896 167 ntBASIC3.13□□□□□ -1.91
TnfP06804 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.13□□□□□ -1.91
TnfP06804 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.12□□□□□ -1.91
TnfP06804 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TnfP06804 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms