Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm23193-201ENSMUST00000102427 82 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm24124-201ENSMUST00000104103 132 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm22473-201ENSMUST00000104114 132 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm14880-201ENSMUST00000117581 292 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm11813-201ENSMUST00000118586 291 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm13228-201ENSMUST00000118937 634 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm16106-201ENSMUST00000119187 294 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm12486-201ENSMUST00000120887 541 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm12872-201ENSMUST00000121835 320 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm22940-201ENSMUST00000158560 155 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm17183-201ENSMUST00000171170 493 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm25361-201ENSMUST00000179358 76 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm21850-201ENSMUST00000179792 359 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Mir7074-201ENSMUST00000183884 63 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm27490-201ENSMUST00000184754 128 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm37313-201ENSMUST00000191673 290 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm44092-201ENSMUST00000204470 258 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.06□□□□□ -1.6
Vti1aO89116 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vti1aO89116 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Gm37742-201ENSMUST00000193263 3979 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.06□□□□□ -1.6
Vti1aO89116 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Vti1aO89116 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vti1aO89116 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vti1aO89116 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Vti1aO89116 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm22493-201ENSMUST00000104494 132 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm12765-201ENSMUST00000117273 615 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm13511-201ENSMUST00000121167 363 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm11229-201ENSMUST00000121993 437 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.05□□□□□ -1.6
Vti1aO89116 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm24251-201ENSMUST00000157324 114 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm24784-201ENSMUST00000157640 62 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm22383-201ENSMUST00000158188 327 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.05□□□□□ -1.6
Vti1aO89116 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm28008-201ENSMUST00000184021 186 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm36934-201ENSMUST00000192007 306 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm44852-201ENSMUST00000207950 369 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm18854-201ENSMUST00000211196 329 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm45735-201ENSMUST00000212779 319 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Vti1aO89116 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm26263-201ENSMUST00000083281 164 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm23851-201ENSMUST00000083831 103 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vti1aO89116 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.05□□□□□ -1.6
Vti1aO89116 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vti1aO89116 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vti1aO89116 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms