Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23799-201ENSMUST00000175559 120 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Snord93-201ENSMUST00000175580 71 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Mir6933-201ENSMUST00000184982 81 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm29259-201ENSMUST00000186396 694 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm29576-201ENSMUST00000188020 678 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm28354-201ENSMUST00000190904 678 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm38214-201ENSMUST00000192581 988 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm43478-201ENSMUST00000200381 292 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm44727-201ENSMUST00000204225 451 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm18855-201ENSMUST00000206689 570 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm7624-201ENSMUST00000209702 435 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm23791-201ENSMUST00000122553 293 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm22563-201ENSMUST00000157333 269 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm25667-201ENSMUST00000157701 275 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm16563-201ENSMUST00000162673 423 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm24082-201ENSMUST00000175175 83 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm20672-201ENSMUST00000176605 261 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm5473-201ENSMUST00000179326 642 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm18747-201ENSMUST00000198129 648 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm43967-201ENSMUST00000203787 301 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm45522-201ENSMUST00000210784 166 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.23□□□□□ -2.05
Hmgb3O54879 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm23264-201ENSMUST00000083372 107 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Hmgb3O54879 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Hmgb3O54879 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.23□□□□□ -2.05
Hmgb3O54879 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm15382-201ENSMUST00000118011 537 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm14469-201ENSMUST00000118363 202 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm16445-201ENSMUST00000120399 714 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm11229-201ENSMUST00000121993 437 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm22794-201ENSMUST00000157228 306 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm23326-201ENSMUST00000157419 105 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm24505-201ENSMUST00000157682 126 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm24998-201ENSMUST00000157908 89 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm24730-201ENSMUST00000158228 117 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm25902-201ENSMUST00000158493 318 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Mir1927-201ENSMUST00000158579 109 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm25360-201ENSMUST00000178786 191 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm10925-201ENSMUST00000189941 678 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm28060-201ENSMUST00000191554 189 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.22□□□□□ -2.05
Hmgb3O54879 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm45048-201ENSMUST00000207058 429 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Hmgb3O54879 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC2.22□□□□□ -2.05
Hmgb3O54879 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Hmgb3O54879 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Hmgb3O54879 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms