Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm45551-201ENSMUST00000211459 928 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc4O35988 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc4O35988 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sdc4O35988 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sdc4O35988 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sdc4O35988 Gm23264-201ENSMUST00000083372 107 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc4O35988 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.69□□□□□ -1.98
Sdc4O35988 Gm44624-201ENSMUST00000208700 2278 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Sdc4O35988 Gm14791-201ENSMUST00000119061 1166 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm11943-201ENSMUST00000119473 327 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm14804-201ENSMUST00000122322 508 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm22107-201ENSMUST00000122548 100 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm22500-201ENSMUST00000158982 99 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm24082-201ENSMUST00000175175 83 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm27527-201ENSMUST00000183903 99 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Mir6374-201ENSMUST00000184003 107 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm28900-201ENSMUST00000185232 156 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm37417-201ENSMUST00000195257 454 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm5551-201ENSMUST00000199720 690 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm18015-201ENSMUST00000214879 316 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.68□□□□□ -1.98
Sdc4O35988 Gm9628-201ENSMUST00000222169 725 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm26494-201ENSMUST00000083154 143 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Gm24493-201ENSMUST00000083805 143 ntBASIC2.68□□□□□ -1.98
Sdc4O35988 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Sdc4O35988 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Sdc4O35988 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc4O35988 Gm12598-201ENSMUST00000117333 830 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm14537-201ENSMUST00000117464 599 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm22026-201ENSMUST00000122735 281 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm22858-201ENSMUST00000174972 76 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm19791-201ENSMUST00000180398 859 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc4O35988 Gm37616-201ENSMUST00000193974 322 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.67□□□□□ -1.98
Sdc4O35988 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm45879-201ENSMUST00000212521 392 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
Sdc4O35988 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc4O35988 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc4O35988 Gm24319-201ENSMUST00000083389 107 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Gm22154-201ENSMUST00000083844 131 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc4O35988 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.67□□□□□ -1.98
Sdc4O35988 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc4O35988 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc4O35988 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc4O35988 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.66□□□□□ -1.98
Sdc4O35988 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc4O35988 Snord65-201ENSMUST00000104269 72 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 Gm11577-201ENSMUST00000118030 737 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 Gm18727-201ENSMUST00000185981 553 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc4O35988 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.66□□□□□ -1.98
Sdc4O35988 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 Gm5309-201ENSMUST00000197416 677 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 Gm43922-201ENSMUST00000205071 328 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc4O35988 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Gm19563-201ENSMUST00000222031 270 ntBASIC2.66□□□□□ -1.98
Sdc4O35988 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc4O35988 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sdc4O35988 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc4O35988 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Sdc4O35988 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.65□□□□□ -1.98
Sdc4O35988 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc4O35988 Gm16017-201ENSMUST00000119834 208 ntBASIC2.65□□□□□ -1.99
Sdc4O35988 Gm14593-201ENSMUST00000119948 294 ntBASIC2.65□□□□□ -1.99
Sdc4O35988 Gm11456-201ENSMUST00000121070 256 ntBASIC2.65□□□□□ -1.99
Sdc4O35988 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.65□□□□□ -1.99
Sdc4O35988 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc4O35988 Gm26411-201ENSMUST00000157668 107 ntBASIC2.65□□□□□ -1.99
Sdc4O35988 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc4O35988 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.65□□□□□ -1.99
Sdc4O35988 Gm5967-201ENSMUST00000172723 494 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms