Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm29479-201ENSMUST00000190352 455 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 Gm19126-201ENSMUST00000207896 509 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.04□□□□□ -1.76
Capn1O35350 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.04□□□□□ -1.76
Capn1O35350 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 Gm45327-201ENSMUST00000211612 565 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Capn1O35350 CT025603.4-201ENSMUST00000225777 413 ntBASIC4.04□□□□□ -1.76
Capn1O35350 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.04□□□□□ -1.76
Capn1O35350 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Capn1O35350 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 Snord14e-201ENSMUST00000082857 90 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Capn1O35350 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Capn1O35350 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.04□□□□□ -1.76
Capn1O35350 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Capn1O35350 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Capn1O35350 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gm12571-201ENSMUST00000118132 243 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm14784-201ENSMUST00000121604 663 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm6568-201ENSMUST00000122274 697 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Capn1O35350 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.03□□□□□ -1.76
Capn1O35350 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gm25621-201ENSMUST00000157223 114 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm23905-201ENSMUST00000157568 109 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm24636-201ENSMUST00000158673 288 ntBASIC4.03□□□□□ -1.76
Capn1O35350 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Capn1O35350 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.03□□□□□ -1.76
Capn1O35350 Gm5258-201ENSMUST00000165437 327 ntBASIC4.03□□□□□ -1.76
Capn1O35350 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Capn1O35350 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gm27940-201ENSMUST00000184449 98 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm29097-201ENSMUST00000190273 422 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm38261-201ENSMUST00000192608 316 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm42622-201ENSMUST00000197229 355 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm44011-201ENSMUST00000203336 394 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Gm9616-201ENSMUST00000221154 781 ntBASIC4.03□□□□□ -1.76
Capn1O35350 CT010480.1-201ENSMUST00000223612 363 ntBASIC4.03□□□□□ -1.76
Capn1O35350 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.03□□□□□ -1.76
Capn1O35350 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.03□□□□□ -1.76
Capn1O35350 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Gm26055-201ENSMUST00000083038 107 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Capn1O35350 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Capn1O35350 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Capn1O35350 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
Capn1O35350 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.03□□□□□ -1.76
Capn1O35350 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Capn1O35350 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Capn1O35350 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Capn1O35350 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Capn1O35350 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Capn1O35350 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Capn1O35350 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Capn1O35350 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Capn1O35350 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Capn1O35350 Gm22488-201ENSMUST00000116811 127 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm13728-201ENSMUST00000117471 400 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm14975-201ENSMUST00000118741 664 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm13419-201ENSMUST00000121711 271 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm12368-201ENSMUST00000122251 434 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm23789-201ENSMUST00000122536 301 ntBASIC4.02□□□□□ -1.77
Capn1O35350 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Capn1O35350 Gm5963-201ENSMUST00000143451 236 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.02□□□□□ -1.77
Capn1O35350 Gm26362-201ENSMUST00000158865 315 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm23638-201ENSMUST00000175073 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm23158-201ENSMUST00000175076 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm22907-201ENSMUST00000175198 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm22625-201ENSMUST00000175382 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm22875-201ENSMUST00000175449 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm25197-201ENSMUST00000175516 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm27857-201ENSMUST00000176930 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm26268-201ENSMUST00000177685 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm23681-201ENSMUST00000178821 126 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.02□□□□□ -1.77
Capn1O35350 Gm21816-201ENSMUST00000179255 360 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms