Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm29299-201ENSMUST00000185609 923 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm28596-201ENSMUST00000185870 696 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm29045-201ENSMUST00000187278 698 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm29573-201ENSMUST00000190291 919 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm32295-201ENSMUST00000192558 696 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm31260-201ENSMUST00000193478 696 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm20997-201ENSMUST00000205148 231 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm44594-201ENSMUST00000208982 407 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Shank1D3YZU1 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.21□□□□□ -1.9
Shank1D3YZU1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm13803-201ENSMUST00000117547 489 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm22219-201ENSMUST00000157562 319 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm23025-201ENSMUST00000158769 111 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm22776-201ENSMUST00000178634 94 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm23767-201ENSMUST00000179278 94 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm23379-201ENSMUST00000180026 107 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Gm42539-201ENSMUST00000197009 308 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.2□□□□□ -1.9
Shank1D3YZU1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Shank1D3YZU1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm24068-201ENSMUST00000104513 132 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm11268-201ENSMUST00000118347 267 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm26476-201ENSMUST00000122618 313 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms