Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Mir875-201ENSMUST00000104698 78 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm11975-201ENSMUST00000118772 481 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm13153-201ENSMUST00000120969 637 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm14694-201ENSMUST00000121856 282 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm24909-201ENSMUST00000157290 280 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm27747-201ENSMUST00000184707 85 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm27608-201ENSMUST00000184822 162 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Mir6400-201ENSMUST00000184870 92 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm28683-201ENSMUST00000187134 615 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm28840-205ENSMUST00000189320 615 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm28835-203ENSMUST00000190062 615 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm29262-201ENSMUST00000190084 196 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm37421-201ENSMUST00000193088 132 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Snord59a-201ENSMUST00000082844 74 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9bA3KGF9 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm23274-201ENSMUST00000104056 130 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm24469-201ENSMUST00000104487 131 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Snord72-201ENSMUST00000104549 81 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm11367-201ENSMUST00000117802 120 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm11313-201ENSMUST00000118779 432 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm14792-201ENSMUST00000119725 258 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm25341-201ENSMUST00000157461 268 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm22598-201ENSMUST00000157600 127 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm25605-201ENSMUST00000158364 124 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm24501-201ENSMUST00000158452 62 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm44259-201ENSMUST00000204996 298 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm8940-201ENSMUST00000212585 219 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm4987-201ENSMUST00000078326 408 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm23678-201ENSMUST00000083157 107 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm23461-201ENSMUST00000083265 107 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.76□□□□□ -1.65
Ccdc9bA3KGF9 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc9bA3KGF9 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9bA3KGF9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9bA3KGF9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9bA3KGF9 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms