Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm15108-201ENSMUST00000116160 803 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm25539-201ENSMUST00000116886 122 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm15111-201ENSMUST00000122142 878 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm24382-201ENSMUST00000122698 107 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm24900-201ENSMUST00000158128 134 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm25977-201ENSMUST00000158697 85 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm3470-201ENSMUST00000160819 420 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm8807-201ENSMUST00000179328 492 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm38053-201ENSMUST00000193938 160 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm43115-201ENSMUST00000196244 160 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm44092-201ENSMUST00000204470 258 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm44223-201ENSMUST00000204854 114 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm20946-201ENSMUST00000212367 461 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm18015-201ENSMUST00000214879 316 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm2436-201ENSMUST00000219562 774 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm5176-202ENSMUST00000220267 583 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Gm19563-201ENSMUST00000222031 270 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav4-2A0A075B638 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm42483-201ENSMUST00000197556 1742 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm25308-201ENSMUST00000104171 158 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm15844-201ENSMUST00000118016 576 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm14771-201ENSMUST00000118249 203 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm15988-201ENSMUST00000118677 367 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm12721-201ENSMUST00000120621 268 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm12443-201ENSMUST00000122308 323 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm16331-201ENSMUST00000144274 498 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm7846-201ENSMUST00000145844 274 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm22516-201ENSMUST00000158266 124 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm24769-201ENSMUST00000158506 129 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm23633-201ENSMUST00000175293 119 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm27025-201ENSMUST00000182392 942 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm19418-201ENSMUST00000197436 580 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm18327-201ENSMUST00000202426 830 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm43090-201ENSMUST00000202459 314 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm23407-201ENSMUST00000082538 91 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Gm8074-201ENSMUST00000095071 252 ntBASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav4-2A0A075B638 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Trav4-2A0A075B638 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav4-2A0A075B638 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Trav4-2A0A075B638 Gm25764-201ENSMUST00000104092 134 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm6574-201ENSMUST00000120037 362 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm7327-201ENSMUST00000120925 652 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm25341-201ENSMUST00000157461 268 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm25910-201ENSMUST00000157620 140 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm19898-201ENSMUST00000177490 251 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm22917-201ENSMUST00000180116 110 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm25528-201ENSMUST00000180264 132 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Mir6401-201ENSMUST00000184499 109 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm9931-201ENSMUST00000193584 1185 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm19177-201ENSMUST00000204520 613 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm7726-201ENSMUST00000206241 231 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm45689-201ENSMUST00000210522 133 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 AC145736.1-201ENSMUST00000214661 479 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm9370-201ENSMUST00000222787 609 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 AC165146.1-201ENSMUST00000223777 900 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Gm7135-202ENSMUST00000191257 1905 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.83□□□□□ -2.12
Trav4-2A0A075B638 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms