Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Gm4968-201ENSMUST00000071458 858 ntBASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H2afb3S4R1G7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Mir6349-201ENSMUST00000184059 97 ntBASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb3S4R1G7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb3S4R1G7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Gm37179-201ENSMUST00000194862 823 ntBASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Gm10138-203ENSMUST00000206952 366 ntBASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb3S4R1G7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb3S4R1G7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb3S4R1G7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb3S4R1G7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms