Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm13216-201ENSMUST00000117145 591 ntBASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm42778-201ENSMUST00000199644 553 ntBASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cx3cr1Q9Z0D9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cx3cr1Q9Z0D9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cx3cr1Q9Z0D9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm38285-201ENSMUST00000192928 922 ntBASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cr1Q9Z0D9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms