Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.84■□□□□ 0.29
Cdh17Q9R100 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh17Q9R100 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh17Q9R100 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh17Q9R100 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Cdh17Q9R100 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdh17Q9R100 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh17Q9R100 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Haglr-201ENSMUST00000100000 2085 ntBASIC16.82■□□□□ 0.28
Cdh17Q9R100 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cdh17Q9R100 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Gm13216-201ENSMUST00000117145 591 ntBASIC16.81■□□□□ 0.28
Cdh17Q9R100 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Gm42545-201ENSMUST00000202755 922 ntBASIC16.81■□□□□ 0.28
Cdh17Q9R100 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh17Q9R100 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.8■□□□□ 0.28
Cdh17Q9R100 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh17Q9R100 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms