Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shroom3Q9QXN0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shroom3Q9QXN0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Gm18032-201ENSMUST00000222541 538 ntBASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Gm23634-201ENSMUST00000175071 91 ntBASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Gm18959-201ENSMUST00000208954 655 ntBASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom3Q9QXN0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom3Q9QXN0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom3Q9QXN0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom3Q9QXN0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom3Q9QXN0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms