Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh5Q9QUM7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh5Q9QUM7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh5Q9QUM7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh5Q9QUM7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.58■□□□□ 0.41
Msh5Q9QUM7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh5Q9QUM7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh5Q9QUM7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh5Q9QUM7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Msh5Q9QUM7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh5Q9QUM7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.57■□□□□ 0.4
Msh5Q9QUM7 CT009764.1-201ENSMUST00000222260 483 ntBASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms