Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prg4Q9JM99 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.69■□□□□ 0.1
Prg4Q9JM99 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.69■□□□□ 0.1
Prg4Q9JM99 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Prg4Q9JM99 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prg4Q9JM99 Rarb-207ENSMUST00000225921 2756 ntBASIC15.69■□□□□ 0.1
Prg4Q9JM99 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.68■□□□□ 0.1
Prg4Q9JM99 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prg4Q9JM99 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.67■□□□□ 0.1
Prg4Q9JM99 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.67■□□□□ 0.1
Prg4Q9JM99 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prg4Q9JM99 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm22697-201ENSMUST00000175194 63 ntBASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm27000-201ENSMUST00000182943 842 ntBASIC15.66■□□□□ 0.1
Prg4Q9JM99 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm7213-201ENSMUST00000215977 950 ntBASIC15.66■□□□□ 0.1
Prg4Q9JM99 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.66■□□□□ 0.1
Prg4Q9JM99 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prg4Q9JM99 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prg4Q9JM99 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms